MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Lactobacillus murinus LAC.1

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from a total of 52 genomes

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PROKKA Genome Annotation:

contigs: 225

bases: 2,084,440 bps

CDS: 1,985

rRNA: 10

Repeat region:

tmRNA: 1

tRNA: 63

misc RNA:

Total features: 2,059

Total number of protein coding genes annotated/found: 1,985

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5005\|JADGKI010000008.1	SEQF5005_00056	NA AA	1209/403	27470-28678	NADH dehydrogenase-like protein
SEQF5005\|JADGKI010000008.1	SEQF5005_00062	NA AA	252/84	33597-33848	hypothetical protein
SEQF5005\|JADGKI010000008.1	SEQF5005_00066	NA AA	3096/1032	36270-39365	hypothetical protein
SEQF5005\|JADGKI010000008.1	SEQF5005_00067	NA AA	588/196	39385-39972	hypothetical protein
SEQF5005\|JADGKI010000189.1	SEQF5005_00073	NA AA	495/165	1669-1175	IS3 family transposase ISWco1
SEQF5005\|JADGKI010000146.1	SEQF5005_00074	NA AA	420/140	278-697	hypothetical protein
SEQF5005\|JADGKI010000146.1	SEQF5005_00075	NA AA	246/82	1054-1299	hypothetical protein
SEQF5005\|JADGKI010000139.1	SEQF5005_00076	NA AA	327/109	360-686	IS3 family transposase ISSth1b
SEQF5005\|JADGKI010000139.1	SEQF5005_00077	NA AA	795/265	773-1567	IS3 family transposase ISSth1b
SEQF5005\|JADGKI010000141.1	SEQF5005_00078	NA AA	264/88	104-367	hypothetical protein
SEQF5005\|JADGKI010000154.1	SEQF5005_00081	NA AA	819/273	863-45	IS3 family transposase ISEnfa5
SEQF5005\|JADGKI010000154.1	SEQF5005_00082	NA AA	507/169	1399-893	hypothetical protein
SEQF5005\|JADGKI010000067.1	SEQF5005_00086	NA AA	639/213	4460-3822	hypothetical protein
SEQF5005\|JADGKI010000067.1	SEQF5005_00088	NA AA	1041/347	7321-6281	hypothetical protein
SEQF5005\|JADGKI010000067.1	SEQF5005_00100	NA AA	1113/371	18631-17519	D-lactate dehydrogenase
SEQF5005\|JADGKI010000067.1	SEQF5005_00101	NA AA	288/96	18943-18656	hypothetical protein
SEQF5005\|JADGKI010000067.1	SEQF5005_00104	NA AA	225/75	20790-20566	hypothetical protein
SEQF5005\|JADGKI010000067.1	SEQF5005_00105	NA AA	297/99	21167-20871	hypothetical protein
SEQF5005\|JADGKI010000067.1	SEQF5005_00110	NA AA	879/293	25979-25101	Farnesyl diphosphate synthase
SEQF5005\|JADGKI010000067.1	SEQF5005_00115	NA AA	429/143	29436-29008	putative protein

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Page last updated: July 7, 2021 08:39:35